Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845188.1_cds_XP_016509251.1_22195
CDS Infomation

[gene=LOC107826739] [db_xref=GeneID:107826739] [protein=ALG-2 interacting protein X-like isoform X2] [protein_id=XP_016509251.1] [location=join(11826..12198,13104..13411,14319..15272,15873..15962,16698..16766,22483..22623,23490..23538,24009..24112,25155..25284,26615..26625)] [gbkey=CDS]
Sequence

ATGGCGGCACCGTCGTCAACAACCAACGTGATGCTCTCAATCTCTGAGAAAAAAACAGTA
TCACTCGATCTCTACCGTCCACTCCGAAACTACATAGTCTACAACTACTCCGAACGTGAA
GCTCAAAATCTCGAAGATGATTTACAAACCCTTAAGGAATATCGTTCCGATATCGAACGT
GCGGGTTCCACTGATTCATCATCGTCTCTTCCTGCTCGTCGTGACCTTTTGCAAAATTAC
TATAAAGCCCTTTGTGCTGTTGAGTCTCGGTTCCCTATTTCGCCTGATCAAGACCATATT
AATTCTGTTACTTTTACTTGGTTTGATGCTTTCAAGAACAAATACAAAGCTGCTCAGCAG
AATATTCATTTAGAAAAAGCTGCAGTTCTGTTCAATCTTGGGGCAGTGCACAGTCAGATG
GGGTTAGGTTTTGATCGTTCATCAGTTGAGGGGCGAAGGCAAGCATCACATTCCTTTATT
GCTGCTGCTGGGGCATTTGCCTTCTTGAGAGACAATGTGGCAATGAAGGCATCAATGGGT
AGCTCAACCACTGTTGATGTCTCAGTCGAATGTGCTGGGATGCTGGAAAGACTTATGTTG
GCTCAGGCGCAGGAGTGTGTTTTTGAGAATAGCATTGCTAAGGGAAACACTCCTGGTGTC
TGTGCAAAGATTTCAAGACAGGTTGGATTGTTTTATGAGGAAGCTTTGGCAGCATTAAGT
GTTGCACCTCTGAACCAGCACTTTGACAAGGCTTGGCTAGCTCACGTTCAACTTAAGGCA
GCACTATTTTATGCTGAGGCCTGTTATAGGTACAGTTTAGAGCTCCATGAGAAAGAAGAA
ATTGCGGAGGAAATTGCAAGGTTGAAGAGCGGGGTCAATGCCTTGTCTGAGGCAAGAAAA
ACATCTCCAAGGGGAGCAGCACAGCAGCTCTTGGATGCAATGAATAAGCTAGAAGCTAGT
TTAAATCTAAACTTGGAGAGGGCTATGAAGGAAAATGATAGAGTCTACCTCATGAGGGTT
CCACCAGCCAGTTCTCTGTCACCACTTCCAGCATTTTCCTTGGTCAAGCCTATGCAGATG
AATGATGTTCTGGATGCTAGCAAGGAGAAGATGTTTGCAAGTCTTGTCCCAGACAACAGT
GCTAAAGCTCTTTCTAGGTACACTGAGATGGTTGATGACGTCATCAGGACTCAAGCCGAG
AAGTTACAACAGGGGAGCGAGCTAGCTCGAGTGAGGCTCAGAGAAATGGACTTACCTGAT
TCTATTCTTGCTTTGGATGGGAATTTATCTCTACCTGTGGCCTTAAAAGAAGATGTAGAG
GCAGTGCAAATTTGTGGTGGTCCTGCTGGTTTGGCTGCTGAGCTGCAGCAACTCAGAGAC
TTGAAGAGGGTGAACCAGGAGTTGCTGGTGCAGACCGAGGAACATTTGCAAAAAGAAGCA
ACAGAAGATGCACAATTTAGAACTCAATTCGGAACACGATGGACAAGGCCTCAATCTACT
ACCTTAACAAAGAACTTGCTGGACAGGTTAAATAGGTTTGCAGCTAACCTGAAGCAAGCT
GCAGAAAGTGATGCCAGGATTGAGCGATCAGTAAGGGATCATGCAGCACTCATGTCAATC
CTTGACCGCCATCCAATCGAATCTGCTCTTCCAACCTTGGCAAGACCAATAATGTCTTTG
GACGCCACTGAAGATGCCATTGTGGGGGCTCTGAAGCAGAGCTTGAGGCATTTAGAAACT
CTTGGTGCTCAGCGGGCTGGACTGGAAGATATGCTGAAAGAGATGAAGAGGAAGGATGAT
ATACTTCCGAAATTGATGACATCCACTGGCTCCCATGAGGATCTTTTCAGGAAGGAGATT
GCAAAATATGATCATATTTGTGAAGAAATTGCTCAAAACCTTGAGGCACAAGAACAATTG
TTGCTGCAGATTCAGGCTCAAAATGAGGAGTTTGCTTCTATTTTCAATCTTGAGGATTAT
AAAGCTTCTCACGAGAGAATCTATAAGCAGATTGAAGCTGCCATTTCAAAATATCGAGAA
ATCAAGGAAAATATCAATGAGGGATTGAAGTTCTACGTAACACTTCAGGAGGCGATCACT
AATGTGAAACAGCAGTGTAGTGATTTTGTGATGACAAGAAGCATACAGTGCCGAGAAATG
ATGGAAGAGGTGCAGAGGCAAATCTCAGGTCTCAGTTTCCAAGATGGTAAAAGTTCAGGT
TGGACTTGA

Peptide Sequence

PEP ID

XP_016509251.1
PEP Infomation

PREDICTED: ALG-2 interacting protein X-like isoform X2 [Nicotiana tabacum]
Sequence

MAAPSSTTNVMLSISEKKTVSLDLYRPLRNYIVYNYSEREAQNLEDDLQTLKEYRSDIER
AGSTDSSSSLPARRDLLQNYYKALCAVESRFPISPDQDHINSVTFTWFDAFKNKYKAAQQ
NIHLEKAAVLFNLGAVHSQMGLGFDRSSVEGRRQASHSFIAAAGAFAFLRDNVAMKASMG
SSTTVDVSVECAGMLERLMLAQAQECVFENSIAKGNTPGVCAKISRQVGLFYEEALAALS
VAPLNQHFDKAWLAHVQLKAALFYAEACYRYSLELHEKEEIAEEIARLKSGVNALSEARK
TSPRGAAQQLLDAMNKLEASLNLNLERAMKENDRVYLMRVPPASSLSPLPAFSLVKPMQM
NDVLDASKEKMFASLVPDNSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLREMDLPD
SILALDGNLSLPVALKEDVEAVQICGGPAGLAAELQQLRDLKRVNQELLVQTEEHLQKEA
TEDAQFRTQFGTRWTRPQSTTLTKNLLDRLNRFAANLKQAAESDARIERSVRDHAALMSI
LDRHPIESALPTLARPIMSLDATEDAIVGALKQSLRHLETLGAQRAGLEDMLKEMKRKDD
ILPKLMTSTGSHEDLFRKEIAKYDHICEEIAQNLEAQEQLLLQIQAQNEEFASIFNLEDY
KASHERIYKQIEAAISKYREIKENINEGLKFYVTLQEAITNVKQQCSDFVMTRSIQCREM
MEEVQRQISGLSFQDGKSSGWT

Transcript Sequence

Gene sequence data has not been registered.